The detailed information of tRNA gene sequence


Sequence ID>W141170228
Genome IDAXXN01000031
Search identical group
Phylum/ClassUnclassified
Speciesdelta proteobacterium JGI 0000059-J07 [AXXN]
Start position on genome 8505
End posion on genome 8408
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tacttcctac
tRNA gene sequence 
GGAAGTGCGCAGGTCACTGGTGGGCCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAAAA
CCGTCCCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tacttaccta
Secondary structure (Cloverleaf model)
>W141170228	SeC(p)	TCA
                   c      GCCA tacttaccta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C A C        C      + | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGTGGGGCGCTAAAACCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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