The detailed information of tRNA gene sequence


Sequence ID>W141170380
Genome IDAXXT01000021
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. JGI 0001013-L10 [AXXT]
Start position on genome 1102
End posion on genome 1015
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgacggttcc
tRNA gene sequence 
GGAGAGTTGGGTGAGTGGTTTAAACCAGCAGTCTTGAAAACTGCCGACGGGCAACCGTCC
GTGAGTTCGAATCTCACACTCTCCGCCA
Downstream region at tRNA end position 
aaatcaatct
Secondary structure (Cloverleaf model)
>W141170380	Ser	TGA
                   c      GCCA aaatcaatct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G T G A G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CGACGGGCAACCGTCC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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