The detailed information of tRNA gene sequence


Sequence ID>W08009323
Genome IDABOX01000005
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesPedosphaera parvula Ellin514 [ABOX]
Start position on genome 263588
End posion on genome 263503
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgttgctgtc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTTAAGGCGCACGCCTGGAAAGCGTGAGTACCTAAAAAGTAC
CGTGGGTTCGAATCCCTCTCTCTCCGcca
Downstream region at tRNA end position 
acgtcattct
Secondary structure (Cloverleaf model)
>W08009323	Ser	GGA
                   c      Gcca acgtcattct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      |   | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     AGTACCTAAAAAGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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