The detailed information of tRNA gene sequence


Sequence ID>W08009343
Genome IDABOX01000018
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesPedosphaera parvula Ellin514 [ABOX]
Start position on genome 21087
End posion on genome 21176
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aactgaagtc
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGTCGATCGCGGCGGTCTTGAAAACCGTTAAGGTGTAACAGCCT
TCGGGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
agtgtaagcg
Secondary structure (Cloverleaf model)
>W08009343	Ser	TGA
                   c      GCCA agtgtaagcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TAAGGTGTAACAGCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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