The detailed information of tRNA gene sequence


Sequence ID>W08009670
Genome IDABQC02000023
Search identical group
Phylum/ClassBacteroidota
SpeciesPhocaeicola plebeius DSM 17135 [ABQC]
Start position on genome 199435
End posion on genome 199350
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaggagtttt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGTACCGCGAGGTACC
CGGGGTTCGAATCCCTGTCTCTCCGCtt
Downstream region at tRNA end position 
tgttattgaa
Secondary structure (Cloverleaf model)
>W08009670	Ser	TGA
                   t      GCtt tgttattgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGTACCGCGAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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