The detailed information of tRNA gene sequence


Sequence ID>W08011165
Genome IDABSI01000010
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobiae bacterium DG1235 [ABSI]
Start position on genome 617322
End posion on genome 617236
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttctatgtc
tRNA gene sequence 
GGAGAAGTGCCAGAGTGGTCGAATGGGACTGACTCGAAATCAGTTGACGGGGTAACTCGT
CCGGGGGTTCGAATCCCTCCTTCTCCGcca
Downstream region at tRNA end position 
tttcgatcta
Secondary structure (Cloverleaf model)
>W08011165	Ser	CGA
                   c      Gcca tttcgatcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C C       G G G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGACGGGGTAACTCGTCC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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