The detailed information of tRNA gene sequence


Sequence ID>W141173287
Genome IDAYCG01000029
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorreliella afzelii IPT109 [AYCG]
Start position on genome 1239
End posion on genome 1165
Amino Acid Pseudo
Anticodon TTC
Upstream region at tRNA start position 
gctcactttT
tRNA gene sequence 
GTCCTCTTCGTCTATCGGTCAGGACTCCAGGTTTTCATCCTGGCAAGAGGGGTTCGATTC
CCCTAGAGGATGTCt
Downstream region at tRNA end position 
tgtcaaggaa
Secondary structure (Cloverleaf model)
>W141173287	Pseudo	TTC
                   T      GTCt tgtcaaggaa
                     G + T
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          T     CAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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