The detailed information of tRNA gene sequence


Sequence ID>W141173363
Genome IDAYCI01000068
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorreliella afzelii IPT138 [AYCI]
Start position on genome 1
End posion on genome 74
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGGGTTTAGCTCAGTTGGCTAGAGCATCGGCTTTGCAAGCCGAGGGTCAAGGGTTCGAG
TCCCTTAACCTCCAtag
Downstream region at tRNA end position 
gcatgtgccc
Secondary structure (Cloverleaf model)
>W141173363	Ala	TGC
                   n      Atag gcatgtgccc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     T - A          T G
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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