The detailed information of tRNA gene sequence


Sequence ID>W141173380
Genome IDAYCJ01000100
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorreliella afzelii IPT142 [AYCJ]
Start position on genome 1005
End posion on genome 931
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aattgcaatT
tRNA gene sequence 
GTCGCTGTAGCTCAGTTGGTAGAGCATAGGACTGAAAATCCTTGTGTCAGGAGTTCGATT
CTCCTCGGCGACATtt
Downstream region at tRNA end position 
atttaaagat
Secondary structure (Cloverleaf model)
>W141173380	Phe	GAA
                   T      ATtt atttaaagat
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     T + G
                     G - C          T T
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T   T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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