The detailed information of tRNA gene sequence


Sequence ID>W08012923
Genome IDABOX01000012
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesPedosphaera parvula Ellin514 [ABOX]
Start position on genome 253161
End posion on genome 253247
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcaccatctc
tRNA gene sequence 
GGTTGGGTGACAGAATAGAATTGTCCCGGTCTTGAAAATCGAGTGAGGGTAAAACCTATG
CGGGTGCAAGTCCTGCCCCAACCGCCA
Downstream region at tRNA end position 
cttttgtctt
Secondary structure (Cloverleaf model)
>W08012923	Ser	TGA
                   c      GCCA cttttgtctt
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
        A A        G      | | + | |     A
      T     G A C A       G C G G G     C
      A     + | | |                 T G
      G     T T G T
        A A        C     GTGAGGGTAAAACCTAT
                    C   A
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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