The detailed information of tRNA gene sequence


Sequence ID>WENV181801729
Genome IDOGSC01000018
Search identical group
Phylum/Class[OGSC] human gut metagenome; fecal sample 8 from infant 5
Species
Start position on genome 51192
End posion on genome 51117
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
caccatctat
tRNA gene sequence 
AGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAGT
CCTGTCCCCGCAACCA
Downstream region at tRNA end position 
caaatattca
Secondary structure (Cloverleaf model)
>WENV181801729	fMet	CAT
                   t      ACCA caaatattca
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T G A        G      + | | | |     A
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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