The detailed information of tRNA gene sequence


Sequence ID>W08005557
Genome IDABIA02000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHoeflea phototrophica DFL-43 [ABIA]
Start position on genome 413823
End posion on genome 413898
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gccacgctct
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCGCAGGTTCGAGT
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
gtccgcctgg
Secondary structure (Cloverleaf model)
>W08005557	Trp	CCA
                   t      GCCA gtccgcctgg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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