The detailed information of tRNA gene sequence


Sequence ID>W08009342
Genome IDABOX01000018
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesPedosphaera parvula Ellin514 [ABOX]
Start position on genome 21000
End posion on genome 21075
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acagacgagt
tRNA gene sequence 
AGGGCGGTAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTCGGTTGGGGGTTCGAGT
CCCTCCCGCCCTGCCA
Downstream region at tRNA end position 
aaactgaagt
Secondary structure (Cloverleaf model)
>W08009342	Trp	CCA
                   t      GCCA aaactgaagt
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     CGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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