The detailed information of tRNA gene sequence


Sequence ID>WENV181850233
Genome IDOGWC01007009
Search identical group
Phylum/Class[OGWC] freshwater metagenome; freshwater
Species
Start position on genome 244
End posion on genome 168
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ctgttgttat
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCCATGGTTCAAA
TCCATGCTCCGCCACCA
Downstream region at tRNA end position 
acttaaagtc
Secondary structure (Cloverleaf model)
>WENV181850233	fMet	CAT
                   t      ACCA acttaaagtc
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     G T A C C     A
      T G A        A      | | | | |     A
    C       C G A G       C A T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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