The detailed information of tRNA gene sequence


Sequence ID>W141186924
Genome IDAYLA01000017
Search identical group
Phylum/ClassGemmatimonadota
SpeciesGemmatimonadetes bacterium JGI 0000112-M07 [AYLA]
Start position on genome 25247
End posion on genome 25171
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccttttcgc
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
atttcaacca
Secondary structure (Cloverleaf model)
>W141186924	Met	CAT
                   c      ACCA atttcaacca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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