The detailed information of tRNA gene sequence


Sequence ID>W08001866
Genome IDABEA01000022
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesGeminisphaera colitermitum TAV2 [ABEA]
Start position on genome 11762
End posion on genome 11690
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcatggcatc
tRNA gene sequence 
GGGCCTTTAGCTCAACGGTCAGAGCAGGGGACTCATAATCCCTTGGTTGCGGGTTCGAAT
CCCGCAGGGCCCAcca
Downstream region at tRNA end position 
tcttgatagt
Secondary structure (Cloverleaf model)
>W08001866	Met	CAT
                   c      Acca tcttgatagt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          T A
                    T     C G C C C     A
      C A A        A      | | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGTT
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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