The detailed information of tRNA gene sequence


Sequence ID>W08009321
Genome IDABOX01000005
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesPedosphaera parvula Ellin514 [ABOX]
Start position on genome 498405
End posion on genome 498479
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggcacggtt
tRNA gene sequence 
GCCAGAGTAGCTCAGGGGTAGAGCAGAGGACTCATAAGCCTTTGGTCGCAGGTTCAATTC
CTGCCTCTGGCACCA
Downstream region at tRNA end position 
acttcaaaag
Secondary structure (Cloverleaf model)
>W08009321	Met	CAT
                   t      ACCA acttcaaaag
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    T     C G T C C     A
        G A        A      | | | | |     A
      G     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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