The detailed information of tRNA gene sequence


Sequence ID>C08008226
Genome IDAM260479
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCupriavidus necator H16 [AM260479, AM260480]
Start position on genome 1090792
End posion on genome 1090720
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ggaacatgtt
tRNA gene sequence 
GCCGAAGTAGCTCAGTCGGTAGAGCAGCTCATTCGTAATGAGAAGGTCGGGGGTTCGATT
CCTCTCTTCGGCAcca
Downstream region at tRNA end position 
cagaattcca
Secondary structure (Cloverleaf model)
>C08008226	Thr	CGT
                   t      Acca cagaattcca
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     T C T C C     A
      T G A        A      + | + | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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