The detailed information of tRNA gene sequence


Sequence ID>C08004997
Genome IDCP000771
Search identical group
Phylum/ClassThermotogota
SpeciesFervidobacterium nodosum Rt17-B1 [CP000771]
Start position on genome 1137199
End posion on genome 1137127
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaatagtaac
tRNA gene sequence 
GCCCCCATCGTCTAGCGGTCTAGGACACTGGCCTTTCAAGCCAGCGGCACGGGTTCGAAT
CCCGTTGGGGGCGcca
Downstream region at tRNA end position 
gatttttcta
Secondary structure (Cloverleaf model)
>C08004997	Glu	TTC
                   c      Gcca gatttttcta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     CGGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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