The detailed information of tRNA gene sequence


Sequence ID>C08005001
Genome IDCP000771
Search identical group
Phylum/ClassThermotogota
SpeciesFervidobacterium nodosum Rt17-B1 [CP000771]
Start position on genome 1133385
End posion on genome 1133313
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ccgaccagtt
tRNA gene sequence 
GCGGGTGTAGCTCAATTGGTAGAGCATCGGCCTTCCAAGCCGAGGGTTGCGGGTTCGAGT
CCCGTCGCCCGCTcca
Downstream region at tRNA end position 
atttttttaa
Secondary structure (Cloverleaf model)
>C08005001	Gly	TCC
                   t      Tcca atttttttaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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