The detailed information of tRNA gene sequence


Sequence ID>C08005000
Genome IDCP000771
Search identical group
Phylum/ClassThermotogota
SpeciesFervidobacterium nodosum Rt17-B1 [CP000771]
Start position on genome 1133465
End posion on genome 1133392
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcttggtaat
tRNA gene sequence 
CGGGGCGTAGCGCAGTTGGCGAGCGCGCCGGTCTTGGGAACCGGAGGTCGCTGGTTCAAG
CCCAGTCGCCCCGAcca
Downstream region at tRNA end position 
gttgcgggtg
Secondary structure (Cloverleaf model)
>C08005000	Pro	TGG
                   t      Acca gttgcgggtg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          C G
                    T     T G A C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C T G G     C
    G       | | | |                 T T
    G       G C G C
      C G A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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