The detailed information of tRNA gene sequence


Sequence ID>C08005010
Genome IDCP000771
Search identical group
Phylum/ClassThermotogota
SpeciesFervidobacterium nodosum Rt17-B1 [CP000771]
Start position on genome 800079
End posion on genome 799992
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagattaatt
tRNA gene sequence 
GGAGAGGTGGCCGAGGGGTCTAAGGCACACGCCTGGAGAGCGTGCGGTGGCCACAAACCA
CCCGTGGGTTCAAATCCCACCCTCTCCGcca
Downstream region at tRNA end position 
gatgaaaaaa
Secondary structure (Cloverleaf model)
>C08005010	Ser	GGA
                   t      Gcca gatgaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      G G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        A     CGGTGGCCACAAACCACCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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