The detailed information of tRNA gene sequence


Sequence ID>W141220809
Genome IDAZYF01000247
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus pimensis DSM 21231 [AZYF]
Start position on genome 3204
End posion on genome 3280
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ccgagaacat
tRNA gene sequence 
GCGCTCGTAGCTCAGTCGGATAGAGCGGGGGACTCCTAAGCCCTAGGCCACTGGTTCGAT
TCCAGTCGAGCGCGCCA
Downstream region at tRNA end position 
cgaggaggga
Secondary structure (Cloverleaf model)
>W141220809	Arg	CCT
                   t      GCCA cgaggaggga
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     T G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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