The detailed information of tRNA gene sequence


Sequence ID>W141220824
Genome IDAZYF01000489
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus pimensis DSM 21231 [AZYF]
Start position on genome 1114
End posion on genome 1025
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtccacgct
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGTTGAAGGGGTACGCCTGGAAAGCGTATGTACGGGCAACCGTA
CCGTGAGTTCGAATCTCATCCTCTCCGCCA
Downstream region at tRNA end position 
gccgagaacg
Secondary structure (Cloverleaf model)
>W141220824	Ser	GGA
                   t      GCCA gccgagaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C T C     A
      T G A        G      + | | | |     G
    G       G C C C       G T G A G     C
    G         | | |                 T T
    T       A G G G
      T G A        G     TGTACGGGCAACCGTACC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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