The detailed information of tRNA gene sequence


Sequence ID>C08007329
Genome IDCP000774
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParvibaculum lavamentivorans DS-1 [CP000774]
Start position on genome 1617112
End posion on genome 1617201
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtcctctgc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGTACCGCACTCGAAATGCGGCGTGCTCGCAAGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cttacggctt
Secondary structure (Cloverleaf model)
>C08007329	Ser	CGA
                   c      GCCA cttacggctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | +                 T T
    T       A A G T
      T G A        A     CGTGCTCGCAAGGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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