The detailed information of tRNA gene sequence


Sequence ID>C08007344
Genome IDCP000774
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParvibaculum lavamentivorans DS-1 [CP000774]
Start position on genome 3054491
End posion on genome 3054583
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acggggagcc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTGTACAGTGTAAAGCT
GTACCGTGGGTTCGAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
ttttccagtc
Secondary structure (Cloverleaf model)
>C08007344	Ser	GCT
                   c      GCCA ttttccagtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTACAGTGTAAAGCTGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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