The detailed information of tRNA gene sequence


Sequence ID>C08007337
Genome IDCP000774
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParvibaculum lavamentivorans DS-1 [CP000774]
Start position on genome 2494195
End posion on genome 2494271
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgaattgg
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGGACCGCTCATAACGGTTTGGTCGCAGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
cctcccgtct
Secondary structure (Cloverleaf model)
>C08007337	Met	CAT
                   g      ACCA cctcccgtct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    G + T
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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