The detailed information of tRNA gene sequence


Sequence ID>C08011473
Genome IDCP000781
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesXanthobacter autotrophicus Py2 [CP000781]
Start position on genome 736404
End posion on genome 736309
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcccgcgcgg
tRNA gene sequence 
GGAAGAGAAGCGTCCCTGGTGGGGCGTCCGGACTTCAAATCCGGGAGGGGCCGCGAGCCG
GTCCTTGGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
gatccgccaa
Secondary structure (Cloverleaf model)
>C08011473	SeC	TCA
                   g      GCCA gatccgccaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      T C C        G      | | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          T     GAGGGGCCGCGAGCCGGTCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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