The detailed information of tRNA gene sequence


Sequence ID>W141223509
Genome IDBADI01000883
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHerbaspirillum sp. B65 [BADI]
Start position on genome 815
End posion on genome 739
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tctcgcttct
tRNA gene sequence 
CGGAGTGTAGCGCAGCCCGGTAGCGCACCTGGTTTGGGACCAGGGGGTCCAAGGTTCGAA
TCCTTGTACTCCGACCA
Downstream region at tRNA end position 
ctcatgaaaa
Secondary structure (Cloverleaf model)
>W141223509	Pro	TGG
                   t      ACCA ctcatgaaaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G + T          T A
                    T     G T T C C     A
      C G A        A      | | | | |     G
    C       C G C G       C A A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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