The detailed information of tRNA gene sequence


Sequence ID>W141223530
Genome IDBADJ01000362
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHerbaspirillum sp. B501 [BADJ]
Start position on genome 524
End posion on genome 450
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaacaagcat
tRNA gene sequence 
GGCCCTGTAGCGCAGTTGGTTAGCGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAG
TCCCGTCAGGGTCGCtc
Downstream region at tRNA end position 
cacagcgacg
Secondary structure (Cloverleaf model)
>W141223530	Asp	GTC
                   t      GCtc cacagcgacg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C G G G     C
    G       | | | +                 T T
    G       G C G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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