The detailed information of tRNA gene sequence


Sequence ID>W141224090
Genome IDBAET01000005
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesGlaciecola punicea DSM 14233 = ACAM 611 [BAET]
Start position on genome 17554
End posion on genome 17478
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttataagat
tRNA gene sequence 
AGGGGTGTAGCTCTAATTGGTAGAGCAGCGGTCTCCAAAACCGATGGTTGGGGGTTCGAG
TCCCTCCACCCCTGCCA
Downstream region at tRNA end position 
ttcatcgacg
Secondary structure (Cloverleaf model)
>W141224090	Trp	CCA
                   t      GCCA ttcatcgacg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     TGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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