The detailed information of tRNA gene sequence


Sequence ID>W141225597
Genome IDBAJJ01000018
Search identical group
Phylum/ClassBacteroidota
SpeciesPhocaeicola barnesiae JCM 13652 [BAJJ]
Start position on genome 55236
End posion on genome 55162
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaaggaaaaa
tRNA gene sequence 
GGTTCCTTGGATGAGTGGCTTAGTCAGCGGTCTGCAAAACCGTGTACGGCGGTTCGAATC
CGCCAGGAACCTCCA
Downstream region at tRNA end position 
ccaaaaacaa
Secondary structure (Cloverleaf model)
>W141225597	Cys	GCA
                   a      TCCA ccaaaaacaa
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     C C G C C     A
      T G A        G      | | | | |     G
    G       G T A G       G G C G G     C
    G         + | |                 T T
    C       A G T C
      T T          A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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