The detailed information of tRNA gene sequence


Sequence ID>W141227004
Genome IDBAKR01000005
Search identical group
Phylum/ClassBacteroidota
SpeciesPorphyromonas cangingivalis JCM 15983 [BAKR]
Start position on genome 5170
End posion on genome 5094
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cgtaattgat
tRNA gene sequence 
GGTCGGGTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCCTGGGTTCGAA
TCCCAGCCTGATCACAA
Downstream region at tRNA end position 
accaaaagga
Secondary structure (Cloverleaf model)
>W141227004	Arg	TCT
                   t      ACAA accaaaagga
                     G - C
                     G + T
                     T - A
                     C - G
                     G + T
                     G - C
                     G - C          T A
                    T     G A C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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