The detailed information of tRNA gene sequence


Sequence ID>W141227042
Genome IDBAKS01000006
Search identical group
Phylum/ClassBacteroidota
SpeciesPorphyromonas macacae JCM 15984 [BAKS]
Start position on genome 101583
End posion on genome 101657
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcaaaatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAAGTTCGAGTC
TTGCCTCCGCAACTA
Downstream region at tRNA end position 
tttagaatgt
Secondary structure (Cloverleaf model)
>W141227042	Met	CAT
                   t      ACTA tttagaatgt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T T C     A
        G A        G      | + | | |     G
      T     C G A G       G T A A G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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