The detailed information of tRNA gene sequence


Sequence ID>W141227057
Genome IDBAKS01000021
Search identical group
Phylum/ClassBacteroidota
SpeciesPorphyromonas macacae JCM 15984 [BAKS]
Start position on genome 30849
End posion on genome 30761
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcgctgtta
tRNA gene sequence 
GGAGAGATGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGTGTGTAAACGCCAAAAGCGT
TTCGCGGGTTCGAATCCCGCTCTCTCCGCac
Downstream region at tRNA end position 
agaacatcac
Secondary structure (Cloverleaf model)
>W141227057	Ser	GGA
                   a      GCac agaacatcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TAAACGCCAAAAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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