The detailed information of tRNA gene sequence


Sequence ID>W141228857
Genome IDBAMF01000002
Search identical group
Phylum/ClassBacteroidota
SpeciesPhocaeicola sartorii JCM 16497 [BAMF]
Start position on genome 115219
End posion on genome 115307
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccccgataaa
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACCCCAAAAGGGT
ATCCGGGGTTCGAATCCCCGTCTCTCCGCtg
Downstream region at tRNA end position 
aatctacaca
Secondary structure (Cloverleaf model)
>W141228857	Ser	GGA
                   a      GCtg aatctacaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G C C C C     A
      T G A        G      | | | | |     G
    G       G C T C       C G G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACCCCAAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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