The detailed information of tRNA gene sequence


Sequence ID>W141229186
Genome IDBAMM01000001
Search identical group
Phylum/ClassBacillota
SpeciesLigilactobacillus apodemi JCM 16172 [BAMM]
Start position on genome 1099
End posion on genome 1027
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
attgagtgat
tRNA gene sequence 
GCCATTTTAGCTCAGCAGGTAGAGCACCACCATGGTAAGGTGGGGGTCACCGGTTCAAGT
CCGGTAAGTGGCTtat
Downstream region at tRNA end position 
tatgagtccg
Secondary structure (Cloverleaf model)
>W141229186	Thr	GGT
                   t      Ttat tatgagtccg
                     G - C
                     C - G
                     C - G
                     A - T
                     T + G
                     T - A
                     T - A          T G
                    T     T G G C C     A
      C G A        A      | | | | |     A
    A       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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