The detailed information of tRNA gene sequence


Sequence ID>W141229189
Genome IDBAMM01000003
Search identical group
Phylum/ClassBacillota
SpeciesLigilactobacillus apodemi JCM 16172 [BAMM]
Start position on genome 29151
End posion on genome 29076
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
gagtttttaT
tRNA gene sequence 
TGGGCATTCGCCAAATCGGTAAGGCAGTGGACTCTGAATCCATAATTTACAGGTTCGAAC
CCTGTATGCCCAATCg
Downstream region at tRNA end position 
aatattacat
Secondary structure (Cloverleaf model)
>W141229189	Gln	CTG
                   T      ATCg aatattacat
                     T - A
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A          C A
                    T     T G T C C     A
      T A A        C      | | | | |     G
    C       A C C G       A C A G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     AATTT
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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