The detailed information of tRNA gene sequence


Sequence ID>W141229218
Genome IDBAMM01000042
Search identical group
Phylum/ClassBacillota
SpeciesLigilactobacillus apodemi JCM 16172 [BAMM]
Start position on genome 915
End posion on genome 1004
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggcccataT
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGTAACACGG
CGCGAGGGTTCAAATCCCTCCTTCTCCGTtt
Downstream region at tRNA end position 
tatggcccgt
Secondary structure (Cloverleaf model)
>W141229218	Ser	GCT
                   T      GTtt tatggcccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGTAACACGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK