The detailed information of tRNA gene sequence


Sequence ID>W141229567
Genome IDBAND01000011
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAcidomonas methanolica NBRC 104435 [BAND]
Start position on genome 34798
End posion on genome 34871
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttcacctgc
tRNA gene sequence 
GCGCCTGTAGCTCAATTGGTCAGAGCAGGCCGCTCATAACGGCTTGGTTGCGGGTTCGAG
TCCTGCCGGGCGCAggg
Downstream region at tRNA end position 
tttcgcctca
Secondary structure (Cloverleaf model)
>W141229567	Met	CAT
                   c      Aggg tttcgcctca
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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