The detailed information of tRNA gene sequence


Sequence ID>W141229879
Genome IDBASL01000639
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia sp. R18 [BASL]
Start position on genome 81799
End posion on genome 81888
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatcttgtgC
tRNA gene sequence 
GGAAGAGTGGCAGAGTGGCCGAATGCGTCTGTCTTGAAAACAGAAGTCGGGCAGCCCCCG
ACCGTGGGTTCGAATCCTACCTCTTCCGTtc
Downstream region at tRNA end position 
ctttttcttt
Secondary structure (Cloverleaf model)
>W141229879	Ser	TGA
                   C      GTtc ctttttcttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    C       A T G C
      C G A        G     AGTCGGGCAGCCCCCGACC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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