The detailed information of tRNA gene sequence


Sequence ID>W141229901
Genome IDBASL01000749
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia sp. R18 [BASL]
Start position on genome 70804
End posion on genome 70893
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagaaaattT
tRNA gene sequence 
GGAAAGATGGCTGAGCGGCCGAAAGCACGTCCCTGCTAAGGACGCATACCCCTAAAGGGT
ATCGAGGGTTCAAATCCCTCTCTTTCCGTat
Downstream region at tRNA end position 
cagggacttt
Secondary structure (Cloverleaf model)
>W141229901	Ser	GCT
                   T      GTat cagggacttt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        A     CATACCCCTAAAGGGTATC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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