The detailed information of tRNA gene sequence


Sequence ID>C08011001
Genome IDCP000812
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga lettingae TMO [CP000812]
Start position on genome 1513621
End posion on genome 1513698
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acttgtgagt
tRNA gene sequence 
CGGGGCGTAGCGCAGACGGCTTAGCGCGCCTGCCTTGGGAGCAGGAGGTCGCTGGTTCAA
GTCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
tatttttttg
Secondary structure (Cloverleaf model)
>C08011001	Pro	TGG
                   t      ACCA tatttttttg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G A C C     A
    C A G A        A      + | | | |     A
  G         C G C G       G C T G G     C
  G         | | | |                 T T
  C         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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