The detailed information of tRNA gene sequence


Sequence ID>C08011012
Genome IDCP000812
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga lettingae TMO [CP000812]
Start position on genome 1964611
End posion on genome 1964700
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataaaattcc
tRNA gene sequence 
GGAGGCGTGTCCGAATTGGCTAAGGAGCCGGTCTTGAAAATCGGTGGGGGTGAAGCCCCC
GTGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
ccttttctat
Secondary structure (Cloverleaf model)
>C08011012	Ser	TGA
                   c      GCCA ccttttctat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       G T G G G     C
    G         | | |                 T T
    G       A G G A
      C T A        G     TGGGGGTGAAGCCCCCGT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK