The detailed information of tRNA gene sequence


Sequence ID>W141231128
Genome IDBATP01000019
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesHaloferula sp. BvORR071 [BATP]
Start position on genome 214614
End posion on genome 214528
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaggaagaat
tRNA gene sequence 
GCCACCGTGGCGGAATCGGTAGACGCCGCGGACTTAAAATCCGTTGCAGGGTAACCTGCG
TGCCGGTTCGAGTCCGGCCGGTGGCACtt
Downstream region at tRNA end position 
tcactgttag
Secondary structure (Cloverleaf model)
>W141231128	Leu	TAA
                   t      ACtt tcactgttag
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    C       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        C     TGCAGGGTAACCTGCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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