The detailed information of tRNA gene sequence


Sequence ID>W141231130
Genome IDBATP01000020
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesHaloferula sp. BvORR071 [BATP]
Start position on genome 101413
End posion on genome 101497
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
aacaccatgt
tRNA gene sequence 
GCTCGGGTGGCGGAATTGGTAGACGCGCTAGACTAAGGATCTAGTGGAGTAATCCGTGGG
GGTTCGAGTCCCCCCTCGAGCACCA
Downstream region at tRNA end position 
ctctttgaat
Secondary structure (Cloverleaf model)
>W141231130	Leu	AAG
                   t      ACCA ctctttgaat
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G + T
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGAGTAATCCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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