The detailed information of tRNA gene sequence


Sequence ID>W141231143
Genome IDBATP01000039
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesHaloferula sp. BvORR071 [BATP]
Start position on genome 199384
End posion on genome 199458
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttggtaac
tRNA gene sequence 
GGCAGAGTAGCTCAGGGGTAGAGCAGAGGACTCATAAGCCTTTGGTCGGCGGTTCAAATC
CGCCCTCTGCTACCA
Downstream region at tRNA end position 
aatgttttcc
Secondary structure (Cloverleaf model)
>W141231143	Met	CAT
                   c      ACCA aatgttttcc
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C C G C C     A
        G A        A      | | | | |     A
      G     C T C G       G G C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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