The detailed information of tRNA gene sequence


Sequence ID>W141231175
Genome IDBATQ01000082
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobium sp. BvORR034 [BATQ]
Start position on genome 75232
End posion on genome 75142
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaccaaaaac
tRNA gene sequence 
GGAAGGGTGGCTGAGCCCGGTTTAAGGCACACGACTCGAAATCGTGCGTAGCCAAAAGCT
ACCGAGGGTTCGAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
cccccatttt
Secondary structure (Cloverleaf model)
>W141231175	Ser	CGA
                   c      GCCA cccccatttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | | | | |     G
  C         G T C G       G A G G G     C
  G           + | |                 T T
  G         A G G C
    T T T A        A     CGTAGCCAAAAGCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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