The detailed information of tRNA gene sequence


Sequence ID>W141232782
Genome IDBAVH01000025
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus TUMSAT_D06_S3 [BAVH]
Start position on genome 51816
End posion on genome 51890
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tcctgcctgt
tRNA gene sequence 
AGGGCTTTCGCCAAGCGGTAAGGCAGCGGCTTTTGATGCCGCCATTCCCTGGTTCGAATC
CAGGTGGCCCTGCCA
Downstream region at tRNA end position 
tatacnnnnn
Secondary structure (Cloverleaf model)
>W141232782	Gln	TTG
                   t      GCCA tatacnnnnn
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T   T          T A
                    T     G G A C C     A
        G A        C      | | | | |     G
      C     A C C G       C C T G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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