The detailed information of tRNA gene sequence


Sequence ID>C08000279
Genome IDCP000361
Search identical group
Phylum/ClassCampylobacterota
SpeciesAliarcobacter butzleri RM4018 [CP000361]
Start position on genome 1529552
End posion on genome 1529454
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acttataaat
tRNA gene sequence 
GGGAGGTTAGTGTACCTGGTGGGCACCACAGGCTTCAACCCTGATTGACGGTTTTGATGA
CAACGCCGTGGGAGGTTCGATTCCTTCACCTTCTCGCC
Downstream region at tRNA end position 
Atttaaaatg
Secondary structure (Cloverleaf model)
>C08000279	SeC	TCA
                   t      CGCC Atttaaaatg
                     G + T
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C
                     T - A          T T
                    T     C T T C C     A
      C C A        A      | + | | |     G
    T       T G T G       G G A G G     C
    G       + | | |                 T T
    G       G C A C
      T G G        C     TTGACGGTTTTGATGACAACGCCGTG
                    A   A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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